Arguments
obj
An RNAseq object, or for the 'normalizationDispatcher',
depending on the type: a CountDataSet, a DGEList, a matrix, or an RNAseq
object respectively
chr.sel
A list of chromosome to restrict the IRanges spaces
returned.
arg
The argument name to check for.
chr.names
The chromosome names, as a character vector, to be
converted to UCSC ones
fun
The name of the function
organism
The organism name
type
character string specifying the type of object
(normalizationDispatcher)
value
the appropriate strand object (strand and strand<-) or the
provided argument value (checkArguments)
...
For .getArguments
a list of named parameters to be
matched against a function formal definition. For .catn
, the values
to be printed. For .list.files
(deprecated), the additional parameters to be filtered
for the list.files function.